Two pieces of good news: antibodies and TPI-287

To help that last, depressing post on CSF diagnostic tests go down, here are two spoonfuls of sugar.

The first is that the tiny biotech startup iPierian, Inc. has been bought by the giant Bristol-Myers Squibb.   iPierian, like at least a half-dozen other companies and several academic labs, is developing an antibody against tau.  Their first disease target is PSP.  The mere fact that BMS is interested indicates that some smart people think this idea has legs, and the R&D resources that big pharma can bring to bear are a great shot in the arm for the tauopathies.  Of course, the Holy Grail from the commercial standpoint is an Alzheimer’s treatment, but if a PSP treatment is spun off as a preliminary or corollary product, excellent.

Antibodies can’t gain access to the intracellular space in the brain.  The scientific idea underlying the antibody development is that misfolded, aggregated tau molecules are vulnerable to antibody attack during their foray through the intercellular space en route from neuron A to neuron B.  It’s like the cute green sea turtle hatchlings getting picked off by gulls during their awkward sprint across the beach.   The notion of tau secretion by neurons is critical to the new templating hypothesis of spread of misfolded and aggregated proteins in neurodegenerative disease.  (The idea has also been called “prion-like” but I’m with those who feel that this creates misplaced fear that all neurodegenerative diseases are transmissible and their sufferers are to be shunned.)

Now, let’s just hope that the stuff is tolerated, both by patients and by BMS’s business strategy.

Another purveyor of anti-tau antibodies, C2N, is in a more advanced stage of the pipeline with its own product.  A Phase I trial is due to start within a year.  More on that in coming weeks.


The other nice piece of news is that a trial of a microtubule-stabilizing drug in PSP and CBD has received IRB approval and will begin soon.  Designated TPI-287, the intravenously infused compound is a member of the taxane family that has been successful as antineoplastic agents.  It’s only in Phase Ib at this point and confined to a handful of centers, mostly in California.  Details should be up on clinicaltrials.gov soon, but here they are now:
Study director: Adam Boxer, MD, PhD
Sponsor: UCSF (Funder: CBD Solutions, Tau Consortium)
Recruiting?: Yes
Official study title: A Phase I, Randomized, Double-Blind, Placebo-Controlled, Sequential Cohort, Dose-Ranging Study of the Safety, Tolerability, Pharmacokinetics, Pharmacodynamics, and Preliminary Efficacy of TPI-287 in Patients with Primary Four Repeat Tauopathies: Corticobasal Syndrome or Progressive Supranuclear Palsy
ClinicalTrials.gov identifier: not yet available
Conditions studied: Corticobasal Syndrome (CBS) and Progressive Supranuclear Palsy (PSP)
Intervention Drugs: TPI-287 or placebo control is administered as an intravenous infusion, once every 3 weeks for 9 weeks during the double-blind dose-finding phase (for a total of 4 infusions). There are 3 infusions in the optional open-label phase; total of 7 infusions in both phases.
Phase: Phase Ib
Purpose: Tau is a microtubule-associated protein, and abnormal tau function has been proposed to play a role in the development and progression of primary four repeat tauopathies, CBS and PSP. TPI-287 is a stabilizer of microtubule dynamics, and the stabilization of microtubules is hypothesized to compensate for the loss of tau function in primary four repeat tauopathies. The purpose of this study is to determine the safety and tolerability of intravenous (IV) infusions of TPI-287 in patients with four repeat tauopathies (4RT), CBS or PSP.
Duration of participation: Approximately 4 months, 7 months with open label extension
Inclusion criteria: Subjects must be between 50 and 85 years of age (inclusive) and be able to walk 5 steps with minimal assistance (stabilization of one arm or use of cane/walker). Subjects must also have a Mini Mental State Examination (MMSE) score of 14 through 30 at the screening visit. Subjects must be willing and able to have brain MRIs as well as two lumbar punctures performed. Subjects must have a reliable caregiver who has at least 5 hours of contact with them per week and is willing to accompany the subject to study visits.
Exclusion criteria: Subjects must not have any medical condition other than CBS or PSP that could account for cognitive deficits (such as Alzheimer’s disease, active seizure disorder, stroke or vascular dementia). Subjects must not have a prominent and sustained response to levodopa therapy. Subjects must not have a history of significant cardiovascular, hematologic, renal, or hepatic disease, significant peripheral neuropathy, major psychiatric illness or untreated depression. Subjects must not have previous exposure to microtubule inhibitors, must not have participated in another interventional clinical trial within 3 months of screening, and must not have been treated with another investigational drug within 30 days of screening.

 

PSP markers in CSF? Not yet

As a PSP-ologist, it takes a lot to discourage me, but the excellent review of CSF markers in the diagnosis of PSP did it. Nadia Magdalinou, Andrew Lees and Henrik Zetterberg of University College London, writing in the JNNP, point out that no CSF measure has been consistently or reproducibly found to differentiate PSP from all of the relevant competing diagnostic considerations.
An excellent study cited in the review found low levels of CSF α-synuclein in Parkinson’s, DLB and MSA relative to PSP and other brain disorders. A value less than 1.6 pg/μl had good (91%) positive predictive value for any synucleinopathy but higher concentrations had poor (20%) negative predictive value.  So that measure is of some small value.
Neurofilament light chain in CSF is elevated in PSP, MSA and CBD, according to another study, with an area under the ROC curve of 0.93. This has been confirmed by others since. This is useful in distinguishing PSP from PD, but when your patient has a poor levodopa response and downgaze problems, PD isn’t really the issue; PSP, MSA and CBD are.
One study of neurofilament heavy chain found that it can differentiate PSP from CBD but not from MSA. That study was published in 2006 and we’re still awaiting confirmation.
You’d think that tau would be the object of intense scrutiny in the differential diagnosis of PSP by CSF, but there’s been relatively little on that. One good study found that the ratio of phospho-tau to total tau is lower in PSP and MSA than in PD. The other studies of phospho-tau in PSP have been negative.
So the winner so far for PSP, limping across the finish line, seems to be neurofilament light chain. It’s not available commercially as far as I can tell; nor should it be, without further study.
Adding to this discouraging picture is the fact that most or all of the studies of CSF markers in PSP have sampled patients in a stage of PSP that allowed clinical diagnosis. By that time, the CSF picture may be more diagnostic than in the earlier stages, when a state marker would be most useful. In other words, the studies were retrospective rather than prospective.
For now, I’m putting my money on imaging.

A road map to a cure, or maybe a grant

For as long as I’ve directed the research grants program at CurePSP, I’ve been a champion of the investigator-initiated approach. Let the experts decide what’s scientifically ripe and feasible for them, I say. I’ve seen too many RFAs produce opportunistic applications that are a stretch for an investigator both intellectually and practically.

But I thought it was best to compromise that principle by creating this “Road Map to a Cure.” It presents a general approach to developing neuroprotective treatment for PSP that builds on recent advances and hot ideas, interacts with the private sector, and is feasible with present technology. Perhaps best of all, its definitions are flexible enough to accommodate a wide variety of investigator-initiated ideas.

In developing the Road Map, I collaborated with Yvette Bordelon, a movement disorders specialist at UCLA and Chair of the Research Committee of CurePSP’s Board of Directors; and Jeff Friedman, a pediatrician/biochemist at Friedman Bioventures and Scripps and a member of CurePSP’s Board.

Road Map to a Cure

As you can see, the Road Map chooses three general hypotheses: a genetic etiologic component, a prion-like (the preferred term is “templating”) mechanism, and a problem with protein folding and management. It also identifies two broad categories of experimental tools that need improvement: animal (or cellular) models and human biomarkers. The Road Map then seeks to develop treatments based on one or more of the three hypotheses and using one or both of the two tools. Then comes the familiar the cascade of treatment development, from target identification to in-vitro or cellular screens to more complex model organisms to early-phase humans trials to late-phase trials.

Of course, some treatments may be ready for testing in animals or humans right now without the preliminary steps, and that would be great.  Will CurePSP triage out any applications lying outside of this development model? Not at all. The Road Map is formulated more as a general guide and we recognize that there are other paths.

We also recognize that the Road Map ignores important things like symptomatic or surgical treatments, studies of exogenous risk factors, descriptive and nosologic studies and, perhaps most important, completely new and risky ideas.

The Road Map, as you’ve guessed, is designed partly as a fundraising tool that allows potential donors to understand how scientists would spend their money. The donors deserve to know that and are quite capable of understanding it if we scientists just take the trouble to explain it to them.

 

Now for something you can use today: the PSPRS

I’m in awe of the scientific creativity and astuteness of the researchers whose work I feature in this blog. My own original work is more modest — but has its uses. In fact, hardly a week goes by without a publication of a research project using the PSP Rating Scale. This post is a shameless attempt to evangelize for it. Click here to download the PSPRS form.

Since my statistician colleague Pam Ohman-Strickland and I published it in 2007, the PSPRS has gradually become the standard way to quantify overall symptomatology and disability in clinical research in PSP. It is equally useful in routine clinical care and requires only 10 minutes to perform. It’s not copyrighted.

Yes, the Unified Parkinsonism Disability Rating Scale, the standard scale for PD, has been validated in PSP, but has nothing about frontal behavioral signs, eye movements, sleep and some other things that are important in PSP. The PSPRS has a nice, round 100 possible points divided into six sections and 28 items. Rather than attempting to rate every possible feature of PSP with equal emphasis, the items’ relative importance in the PSPRS mirrors that in the most common form of PSP itself. This design feature results in the PSPRS progressing about 11 points per year regardless of the magnitude of the score or disease duration.  The score is useful as a prognostic indicator and I’m presently working on refining that.

The PSPRS requires some skill in the neurological exam, so cannot be applied by patients or caregivers. But they can bring it to the attention of their neurologists. Click here for the original paper in Brain that explains the details of how to administer the PSPRS.

Like everyone, I’m hoping for a more objective, reproducible test to quantify the state of neural degeneration in PSP – maybe something with spinal fluid or MRI. But until then, the PSPRS is the best we’ve got and it’s dirt cheap.

DNA methylation for the rest of us

Silly me. I thought I could write some posts in technical language and others on different topics in plain English. But I find that I just don’t have the heart to leave my non-technical readers in the dark about exciting research findings, even if the payoff for patients is years away. So here’s a brief, non-technical translation of my last post on DNA methylation.

A paper in a prestigious journal this week reports that the DNA of people with PSP has an unusual pattern of small chemical markings in a few areas, including the area that includes the gene that makes tau protein.

Time out for some basics:

DNA is the chemical that bears the genetic code. It’s like a language with an alphabet of only four letters. Each word has three letters and there are 20 available words. The “letters” are A, C, G and T, which are abbreviations for the four chemical components that make up the DNA strand. Each three-letter “word” specifies an amino acid. A string of amino acids that the cell produces according that that instruction (like a sentence, to continue our analogy) is called a protein. All of the chemical processes and structures of the body rely on proteins of many different varieties that are determined mostly by the order of their amino acids.

Tau is the protein that forms the abnormal blobs in brain cells in PSP, called “neurofibrillary tangles.” Its normal function is to help maintain the internal skeleton of the brain cells, which doubles as monorail system to transport nutrients to where they’re needed.

These chemical markings, called “methyl groups,” are very simple – each is just one carbon atom with three hydrogen atoms on it. It’s been known for many years that such “methylation” of the amino acids in DNA is one way to regulate the coding of the DNA into proteins. In PSP, the tau protein is abnormal in several ways, and abnormal methylation of the tau protein’s gene, it’s now been discovered, could be the reason.

We already know that the gene that encodes the tau protein is abnormal in other ways. But those are actual genetic mutations – alterations in the DNA code itself. The new research article concludes that the mutation in the order of bases in the DNA causes the abnormal methylation, which then causes the damage of PSP.

We’ve also long known that methylation can be influenced by the chemical environment of the cell, examples being certain toxins or nutritional deficiencies. So this new finding suggests that we should look more closely at those sorts of things as possible causes of PSP. It also suggests that drugs that affect methylation could potentially stop or slow progression of the disease.

As you’d imagine, this opens the door to a whole new area of research in PSP. These are exciting times!

Is DNA methylation the key?

Very cool paper in PLoS Genetics this week reporting alterations in DNA methylation in PSP.  It’s from Giovanni Coppola’s lab at UCLA, with Yun Li as first author and collaborators from UCSF.  They used Illumina probes to profile DNA methylation genome-wide in WBCs.  The result was that in PSP, MAPT showed more methylation than controls or subjects with FTD.  But the same was true for three other genes near MAPT: KIAA1267, ARHGAP27 and DND1.  All lie within the H1 haplotype block, an inversion spanning 1.8 Mb and 48 genes at 17q21.31.

A new statistical technique called “causal inference” suggested that something in the H1 haplotype caused the differential methylation, which in turn caused the PSP phenotype.  They conclude that a quantitative trait locus for methylation exists within the H1 haplotype, but that differential methylation is a characteristic of H1 independent of the presence of PSP.

A supplemental experiment looking for differences in gene expression correlating with methylation changes came up empty, unfortunately.

So now we have evidence that the pathogenetic mechanism of the H1 haplotype is differential methylation of MAPT and/or nearby genes.  Work by others has suggested that H1 operates, rather, by increasing MAPT expression, but that observation is not consistently replicated.  Either way, we still have to explain what else is necessary to the etiology of PSP.  After all, H1 is present in 95% of subjects with PSP aut also in a majority of the rest of the population.

Do any geneticists out there have any special insights to share?

Tideglusib: the English translation . . .

If you’ve read the technical-language post below and are intrigued but confused, here’s a plain English version.  Use the Comments section below to tell me if it’s clear enough for an educated non-technical reader.

The current issue of the journal Movement Disorders includes two articles on a recent trial of an experimental drug for PSP.  The journal’s editors asked me to write an “editorial” (actually, an overview for the sake of perspective) for the journal’s technical readers.  That appears in the same issue and its main point is this:

The two original papers in Movement Disorders report a trial of the experimental drug “tideglusib” in 146 people with PSP.  (The drug is not approved in any country or available in pharmacies.)  The study took place in 2011 and 2012 at multiple institutions in the US, Spain, Great Britain and Germany.  Like any good trial, it included administration of a dummy treatment (a “placebo”) to some of the people with PSP randomly chosen as a comparison group.  The neurologists doing the study tested all of the subjects with the PSP Rating Scale, which is the standard test used in research on PSP, at the start and end of the one year of treatment.  No one expected tideglusib to give improvement over time; the best outcome hoped for was that the rate of decline would be slower on tideglusib than on placebo.

As a kind of supplementary part of the study, 37 of the 146 patients also received a brain MRI at the start and end of the year of treatment in addition to the PSP Rating Scale.  The idea was to compare the patients on tideglusib with those on placebo with regard to the amount of shrinkage (“atrophy”) of various parts of the brain over the year of the study.  This was added mostly as a test of the ability of MRI to provide an objective test to supplement the PSP Rating Scale, which uses interview questions and physical examination.

The overall study, unfortunately, showed absolutely no benefit of tideglusib over placebo on the PSP Rating Scale.  But the sub-study using MRI did show quite a difference, 58% less atrophy of the cerebrum on tideglusib relative to placebo. 

Now, some researchers have known about this result for several months because they heard its principal author, Dr. Günter Höglinger of Munich, Germany, present it at conferences.  Most experts whom I have spoken to find it hard to accept that the MRI could show an effect of the drug without any effect on the PSP Rating Scale or on any of the other physical or psychological examination measures that were applied.

Some of the skeptics point out that the group of 37 receiving the MRI may have been too small to be representative of the overall group of 146 and that the 9 patients on placebo may have been different from the 28 patients on tideglusib even before the study began.  It’s true that these numbers of patients are awfully small for drawing definitive conclusions and raise the possibility of a statistical fluke.

Others object on grounds that the most pronounced effect on the MRI was in the areas of the brain least affected in PSP.  But since I’m a “glass-half-full” kind of guy, I see this as a clue to guide further research.  Maybe brain tissue in the more advanced stages of PSP is beyond help of this particular drug, and only the more PSP-resistant, slowly-degenerating parts of the brain responded.  If so, maybe that means that we should look for ways to improve tideglusib rather than discarding it because it gave no outwardly measurable improvement.  Another conclusion is that we should work on ways to diagnose PSP earlier, when no part of the brain has progressed beyond the ability of a drug like tideglusib to help.

In another post, I’ll explain what tideglusib does in brain cells.  It’s complicated.

Tideglusib: Just a new straw to grasp or the real deal?

My inaugural post!  Here goes.

The current issue of Movement Disorders has two papers on a late Phase II study of the GST-3β inhibitor tideglusib in PSP.  The first, by Eduardo Tolosa et al, reports the failure of the drug to slow progression as measured by the PSP Rating Scale and a number of other clinical scales.  But the second, by Günter Höglinger et al, analyzes a subgroup of patients from the same study who had MRIs before and after treatment.  They found 58% less progression of cerebral atrophy in the active drug group relative to placebo.  Most of the effect occurred in the parietal and occipital lobes, the neocortical areas least affected in PSP.

Full (really full) disclosure: I was a one of the co-I’s in the study, though not one of the sites doing the MRIs (they were the European sites); the primary outcome measure was a scale that I devised and published; I consulted for the industry sponsor in the study design; Günter Höglinger is my very good friend (as is Eduardo, but his paper isn’t the controversial one); and I have an editorial in the same issue of Movement Disorders trying to interpret the findings.  Is my bias reduced by my inability to figure out in which direction it points?

Anyhow, I’ve heard various reasons why this couldn’t possibly be a real neuroprotective effect, and none of them are all that convincing.  But I don’t want to bias you.  Discuss.